David A. Bader
David A. Bader
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Parallel Programming
Streaming Breakpoint Graph Analytics for Accelerating and Parallelizing the Computation of DCJ Median of Three Genomes
The problem of finding the median of three genomes is the key process in building the most parsimonious phylogenetic trees from genome rearrangement data. The median problem using Double-Cut-and-Join (DCJ) distance is NP-hard and the best exact …
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